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# |
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# some minimal customization ;) |
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# |
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[base] |
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# if empty, will be just "Anonymous Development Server" |
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name=Woodward, the Caltech Cartwheel server |
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[notification] |
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# |
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# all of these fields are *required* |
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# |
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# address mail is sent *from* |
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from_address=titus@caltech.edu |
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# address errors are sent *to* |
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to_address=t@idyll.org |
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# mailserver through which messages are sent |
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mailserver=teckla.idyll.org |
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########################################### |
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[database] |
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# host can be left empty for localhost |
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host= |
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# user can be left empty for default user |
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user= |
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# dbname can be left empty for default name (== user, with Postgres) |
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dbname=cartwheel-dev |
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# number of persistent object handles to allocate; default is 2. |
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n_handles=1 |
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[quixote] |
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# can be left empty; uses cartwheel.config.gethostname if so. if filled, |
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# this must be a fully-qualified name, e.g. 'chabry.caltech.edu'. |
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hostname=woodward.caltech.edu |
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# display_exceptions should be 0 for production, 1 for development. |
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display_exceptions=1 |
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# exit after ... |
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#exit_after_requests=1 |
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########################################### |
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[programs] |
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show_command=0 |
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[blast] |
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# blastdb can be left empty if the environment variable BLASTDB is set. |
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blastdb=/scratch/blastdb |
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# blastpath can be left empty if 'blastall' is in your PATH. |
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blastpath= |
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# formatdb_path can be left empty if 'formatdb' is in your PATH |
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formatdb_path= |
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[seqcomp] |
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# path can be left empty if 'seqcomp' is in your PATH. |
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path= |
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[blastz] |
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path= |
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[lagan] |
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path=/usr/local/share/lagan12/lagan.pl |
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data_dir=/usr/local/share/lagan12 |
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[find_patch] |
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path= |
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[hmmgene] |
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path= |
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[geneid] |
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path= |
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[genscan] |
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path= |
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########################################### |
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# this section doesn't need to exist if the Web server isn't running. |
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[website] |
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# site/lab permissive -- allow all connections unless explicitly |
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# disallowed, or no? |
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site_permissive=1 |
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lab_permissive=1 |
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# how long should sessions last? This should be an acceptable INTERVAL |
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# type in postgresql, e.g. "n days", or "m minutes", or whatever. |
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expire_sessions=1 day |
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default_lab=1 |
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[scgi] |
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prefix=/canal |
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port=4000 |
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