|
|
|
@116
|
[116]
|
01/12/07 15:15:13 |
diane |
If setuptools and nose is available add "python setup.py test" target |
|
|
|
@115
|
[115]
|
01/10/07 16:43:12 |
diane |
Always force building the python c paircomp extension.
Because cmake will … |
|
|
|
@114
|
[114]
|
01/10/07 16:40:34 |
diane |
Update the paircomp python interface to work with the new templated … |
|
|
|
@113
|
[113]
|
01/10/07 16:39:10 |
diane |
Allow handling lower case sequence.
When I changed paircomp to treat … |
|
|
|
@110
|
[110]
|
01/05/07 15:26:10 |
diane |
Add operator<< overloads for the various NwayComparison? types.
Mostly this … |
|
|
|
@109
|
[109]
|
01/04/07 18:09:20 |
diane |
Use const references instead of passing by value for several Nway support … |
|
|
|
@108
|
[108]
|
01/04/07 18:06:18 |
diane |
Remove a tab and replace it with spaces in ImmutableComparison?.hh |
|
|
|
@107
|
[107]
|
01/04/07 18:02:48 |
diane |
Assignment requires initializing an object twice, so replace it with
just … |
|
|
|
@106
|
[106]
|
01/04/07 16:44:25 |
diane |
add the class Match to the paircomp namespace |
|
|
|
@105
|
[105]
|
01/04/07 16:00:46 |
diane |
pop the longer function definitions out of class declaration
(this makes … |
|
|
|
@104
|
[104]
|
01/04/07 15:10:34 |
diane |
Add in some documentation into NwayComparison?
(Doxygen format) |
|
|
|
@103
|
[103]
|
01/04/07 13:15:28 |
diane |
Mussa's sequence class needs to be immutable, which required that
I change … |
|
|
|
@99
|
[99]
|
12/22/06 16:19:44 |
diane |
templatize the sequence type for the paircomp and nway algorithms. |
|
|
|
@98
|
[98]
|
12/22/06 16:04:58 |
diane |
Also build at the test-nway test from c++-tests.
The test-empty, used hard … |
|
|
|
@97
|
[97]
|
12/20/06 17:25:16 |
diane |
Try to more thoroughly use references for the sequence strings
that we've … |
|
|
|
@96
|
[96]
|
12/19/06 18:51:42 |
diane |
finish getting all of paircomps unittests to run out of source.
the … |
|
|
|
@95
|
[95]
|
12/19/06 17:05:10 |
diane |
add CMakeLists.txt files for building paircomp with cmake |
|
|
|
@94
|
[94]
|
12/19/06 17:03:44 |
diane |
Visual Studio didn't like reusing the same parameter name for different … |
|
|
|
@93
|
[93]
|
12/19/06 17:03:04 |
diane |
VisualStudio? didn't make STL algorithms available in the default namespace |
|
|
|
@92
|
[92]
|
12/19/06 17:02:20 |
diane |
tabs are bad and they make the code harder to read |
|
|
|
@91
|
[91]
|
12/19/06 17:01:40 |
diane |
rename index to strchr for mingw
the win32 version of mingw doesn't seem … |
|
|
|
@90
|
[90]
|
12/19/06 16:17:24 |
diane |
delete unnecessary *.py[co~] files on my branch |
|
|
|
@88
|
[88]
|
12/19/06 16:01:57 |
diane |
make my own repository |
|
copied from trunk:
|
|
|
|
@87
|
[87]
|
12/05/06 08:30:47 |
t |
added test for valid/invalid BLAST program |